PYME.Analysis.Tracking.trackUtils module¶

class PYME.Analysis.Tracking.trackUtils.Clump(pipeline, clumpID)¶

Bases: object

property dtypes¶

keys()¶

save(filename, keys=None)¶

property varnames¶

class PYME.Analysis.Tracking.trackUtils.ClumpManager(pipeline)¶

Bases: object

property all¶

class PYME.Analysis.Tracking.trackUtils.FeatureMean(clump)¶: Bases: object

class PYME.Analysis.Tracking.trackUtils.FeaturePlot(clump)¶: Bases: object

class PYME.Analysis.Tracking.trackUtils.FeatureStd(clump)¶: Bases: object

PYME.Analysis.Tracking.trackUtils.FitJumpSizeDist(velocities, startParams, dT)¶

class PYME.Analysis.Tracking.trackUtils.Track(pipeline, clumpID)¶

Bases: Clump

property distance¶

property movieplot¶

property msdinfo¶

property msdplot¶

property trajectory¶

class PYME.Analysis.Tracking.trackUtils.TrackManager(trackList)¶

Bases: object

property all¶

property filtered¶

PYME.Analysis.Tracking.trackUtils.calcTrackVelocity(x, y, ci, t)¶

PYME.Analysis.Tracking.trackUtils.findTracks(pipeline, rad_var='error_x', multiplier='2.0', nFrames=20)¶

PYME.Analysis.Tracking.trackUtils.findTracks2(datasource, rad_var='error_x', multiplier='2.0', nFrames=20, minClumpSize=0)¶

PYME.Analysis.Tracking.trackUtils.jumpDistModel(p, r, N, t, dx)¶

PYME.Analysis.Tracking.trackUtils.jumpDistProb(r, D, t)¶

PYME.Analysis.Tracking.trackUtils.powerMod2D(p, t)¶

PYME.Analysis.Tracking.trackUtils.powerMod3D(p, t)¶